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Cases have now reached 149, including 100 fatalities.
The case is in Tchomia, on Lake Albert, which straddles the DRC-Uganda border.
As the WHO detailed stepped-up efforts to prepare four key countries to prevent and detect cases, tests in Uganda ruled out three suspected cases.
So far, there are 43 confirmed and probable cases, and health officials are probing 46 additional supected illnesses.
The outbreak involves 2 districts in the country's "cattle corridor" and occurs as Rwanda is reporting the disease in animals and possibly people.
Several factors heighten the risk of spread, including flooding, people and animal movement, and connections to other countries.
Rain, war, and other factors have helped create the largest cholera outbreak in history, researchers say.
Researchers described tactics and tools for use in conflict and humanitarian zones and showed threats from cominated blood bank supplies.
The man, who died from his infection, is a brother of the first confirmed case-patient.
Genetic analysis of a virus from Uganda revealed that it is 87% identical to MERS-CoV.
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