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The agency is tracking 10 active outbreaks across the country, including one involving almost 500 cases in New York City.
The likely exposure was inoculated rabbit skins, but airborne spread cannot be ruled out.
Zika infection in early pregnancy raise the risk of microcephaly 17 times, the study says.
Partial protection from earlier dengue exposure in the favela population might explain Zika's quick decline there.
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