Flu Scan for Sep 27, 2018

News brief

UK study: High flu vaccine uptake in seniors but modest protection

Flu vaccine uptake in UK seniors has been high in recent flu seasons, but vaccine effectiveness (VE) has been modest in this age-group and the vaccine has been ineffective against the most severe strain, according to a study today in Eurosurveillance.

Experts with Public Health England and elsewhere in the country assessed data from the 2010-11 season through 2016-17. The found that vaccine coverage was 64% in 65- to 69-year-olds, 74% in 70- to 74-year-olds, and 80% in people aged 75 and older.

Overall VE was 32.5% across the seven seasons against lab-confirmed influenza. By subtype, the vaccine was 60.8% effective against H1N1 and 50.5% against influenza B viruses but only a statistically non-significant 5.6% against H3N2, the strain that typically causes the most severe disease. In addition, VE was statistically significant only in 65- to 74-year-olds, among whom flu VE was 45.2%. VE was -26.2% in those aged 75 to 84 and -3.2% in people 85 and older.

The researchers also found a flu-related mortality rate of 74.9 per 100,000 population in people 75 and older, compared with 9.3 per 100,000 in those aged 65 to 74.

The authors conclude, "We found that despite achieving very high influenza vaccine uptake in those aged 65 years and older, the average annual age group-specific influenza-associated mortality risk in England was highest in those aged 75 years and older over a six-season period and during seasons dominated by circulation of influenza A(H3N2)."
Sep 27 Eurosurveill report

 

Study: Bivalent avian flu vaccine tied to less H7N9 in Chinese poultry

A surveillance study involving poultry farms and markets in China before and after the country launched a new bivalent H5/H7 vaccine to protect poultry in September 2017 found that the prevalence of H7N9 viruses dropped dramatically after the vaccine was introduced.

The Chinese researchers, however, found some worrisome evidence that some H7N9 viruses have acquired genes from duck influenza viruses and have adapted to ducks, which could spread the virus more widely, given that domestic ducks are raised in open fields where they can mix with other species and spread the virus to other locations.

Writing in Cell Host and Microbe today, the researchers collected 53,884 poultry samples across the country from February 2017 to January 2018. In total, they found 252 low-pathogenic H7N9 viruses, 69 highly pathogenic H7N9 viruses, and 1 highly pathogenic H7N2 virus. Of the viruses, 2 low-pathogenic and 14 highly pathogenic strains were collected after bivalent vaccine introduction. The highly pathogenic H7N9 viruses fell into nine genotypes, one of which is predominant, widespread, and highly virulent in mice. The investigators also found that some of the H7N9 and H7N2 viruses carrying duck genes that were lethal in ducks.

Vaccination coverage was much lower at farms raising fast-growing meat chickens, where some only used the previously purchased H5 vaccine. However, coverage was 73.1% at layer farms and those raising slow-growing meat chickens.

The team concluded that the vaccine played an important role in cutting H7N9 levels in poultry and likely prevented the sixth wave of human illness, during which only three cases were reported. The authors added that although the duck-adapted viruses were found in Fujian province, the findings raise new challenges to controlling avian flu in China, and they say one option may be applying the bivalent vaccine to ducks.
Sep 27 Cell Host Microbe abstract

News Scan for Sep 27, 2018

News brief

CDC reports multidrug-resistant fungus linked to fungicide exposure

A case report today from the Centers for Disease Control and Prevention (CDC) details the detection of a multidrug-resistant fungus in patients from three states.

The cases, described in today's Morbidity and Mortality Weekly Report, involve patients in Pennsylvania, Virginia, and California who were infected or colonized with Aspergillus fumigatus, an environmental mold that's the primary cause of invasive aspergillosis—an invasive infection that typically affects immunocompromised patients. Resistance to triazole antifungals in A fumigatus is associated with treatment failure and increased mortality. Increasingly common reports of triazole-resistant A fumigatus in Europe prompted the CDC to initiate passive laboratory monitoring for triazole-resistant A fumigatus isolates in 2011.

The monitoring identified a total of seven isolates (out of 2,300) collected from 2010 through 2017 that were carrying the resistance marker TR34/L98H. This resistance marker confers resistance to all triazoles and has been associated with triazole fungicide use in agriculture rather than previous patient exposure to triazole antifungals. Four of the seven patients identified had no known exposure to antifungal medications before culture of the resistant isolate, supporting environmentally acquired resistance. Three of the patients died from their infection.

The authors of the report note that A fumigatus spores are known to be carried long distances in the air, which can put patients at risk for infections with resistant strains, even when those patients live in areas without known agricultural fungicide use.

"Given that A. fumigatus can undergo selection for antifungal resistance during triazole fungicide exposure in the environment, and spores of resistant strains might be transmitted through the air and inhaled, further exploration of triazole fungicide use and presence of triazole-resistant A. fumigatus in these areas is warranted," the CDC researchers write.
Sep 27 CDC MMWR report

 

CDC: 135 Salmonella cases linked to Honey Smacks; outbreak probe over

In a final report on a Salmonella outbreak tied to Honey Smacks cereal, the Centers for Disease Control and Prevention (CDC) confirmed 135 cases in 36 states. The new total represents an increase of 5 cases since the previous CDC update on Aug 31.

There were no deaths reported in this outbreak, but 34 people were hospitalized. New York, Pennsylvania, and California reported the most cases, with 16, 12, and 11 cases, respectively. "As of September 26, 2018, this outbreak investigation is over," the CDC said.

Patients reported illness onset from Mar 3 to Aug 29, and patients ranged in age from less than 1 year to 95 years old. The median age was 57, and 69% of patients were female. Whole-genome sequencing from isolates collected from eight food samples and 91 patients did not show antibiotic resistance.

Lab testing showed the outbreak strain wasSalmonella Mbandaka, which was identified in a sample of unopened Kellogg's Honey Smacks cereal collected from a retail location in California and in samples of leftover Honey Smacks collected from the homes of sickened patients in Montana, New York, and Utah.

On Jun 14, Kellogg Company recalled Honey Smacks cereal, and the CDC said that consumers should not eat Kellogg's Honey Smacks cereal with a "best if used by" date of Jun 14, 2019, or earlier. Honey Smacks has a shelf life of 1 year.
Sep 26 CDC report

 

Republic of Congo to vaccinate more than 1 million against yellow fever

Yesterday the Republic of Congo launched a 6-day yellow fever vaccination campaign targeting 1 million people in the port city of Pointe-Noire and surrounding areas, the World Health Organization (WHO) said in a press release yesterday.

The campaign was launched in response to an outbreak that began in late August, when yellow fever was confirmed in a 20-year-old man at a health center in the city, which has a population of 1.2 million.

"Since then, no other case has been confirmed in the country, but more than 200 suspected cases have been reported since the beginning of the year, with most of these notified by the health authority in Pointe Noire," the WHO said in the release. "It's possible that there are also undetected cases as a large proportion of the Pointe Noire population seeks care in the private system and the national surveillance system may not be receiving notification."

The population of Pointe-Noire has suboptimal yellow fever vaccine coverage and high-density  Aedes aegypti populations, which could fuel urban transmission of the mosquito-borne virus.

According to the WHO, the campaign uses vaccines from the global emergency yellow fever vaccine stockpile managed by the International Coordination Group on Vaccine Provision and funded by Gavi, the Vaccine Alliance.
Sep 26 WHO press release 

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