An expanded screening protocol helped a New York City hospital identify more patients who were at risk for Candida auris infection, researchers reported yesterday in the American Journal of Infection Control.

The protocol was implemented at Mount Sinai Brooklyn following the diagnosis of a patient with an acute bloodstream caused by C auris, a multidrug-resistant fungus, and an outbreak investigation that identified 118 people who were directly exposed to the patient and eight additional patients with C auris colonization. Under the hospital's screening protocol at the time, which only applied to patients who had been transferred from skilled nursing facilities (SNFs) that cared for residents with C auris, the patient had not been screened for C auris upon admission because he was not considered high-risk.

After the investigation, the hospital expanded its screening protocol to include patients from any SNF. In addition, patients who had tracheostomies or were ventilator-dependent were labeled high-risk and isolated to prevent possible transmission. When researchers compared the 9 months prior to the screening change with the year after, they found that the number of patients screened rose from 34 under the old protocol to 557 under the new protocol, and the C auris positivity rate increased from 1.8% to 2.4%.

Broader screening keeps patients safer

The study authors say the expansion of the protocol captured eight additional patients with C auris colonization who would not have been identified under the old protocol and could have spread the pathogen to the hospital environment and other patients.

"Notably, we saw no spread of this infection from the eight patients identified by the expanded screening protocols who would have been missed by our prior protocol," study co-author and Mount Sinai Brooklyn president Scott Lorin, MD, said in a press release. "When you consider how many other people they came into contact with during their hospital stays, that's a lot of patients kept safer by the implementation of broader screening."

Lorin and his colleagues say admission screening for C auris should be a practice that all hospitals consider, especially in communities where C auris has been detected.

A systematic review and meta-analysis of studies conducted in 29 African countries found a high burden of shigellosis and concerning levels of antibiotic resistance, researchers reported this week in BMC Infectious Diseases.

The review by researchers at the University of Ghana Medical School included 116 studies examining a total of 99,510 patient samples. The meta-analysis indicated that the overall pooled prevalence of Shigella bacteria across Africa was 5.9%, with regional prevalences of 6.9% in southern Africa, 6.7% in northern Africa, 6.2% in eastern Africa, 4.5% in central Africa, and 4.0% in western Africa. Shigella prevalence was found to be higher in children (6.6%) than in adults (3.6%).

The most prevalent species of Shigella was Shigella flexneri (53.6%), followed by Shigella sonnei (11.5%), Shigella dysenteriae (10.1%), and Shigella boydii (7.7%).

Resistance to ampicillin, trimethoprim-sulfamethoxazole, and chloramphenicol was high (77.8%, 65.1%, and 45.2%, respectively), while resistance to ceftriaxone (8.5%) and ciprofloxacin (10%) was low. 

Conflicts could amplify spread of shigellosis

Shigellosis is a highly infectious gastrointestinal condition that causes an estimated 125 million cases of diarrhea and 160,00 deaths each year. It primarily spreads through the fecal-oral route, often because of inadequate sanitation and consumption of contaminated food or water.

"The estimated prevalence of 5.9% for Shigellosis in the African subregion is a cause for concern, as it indicates a significant risk of exposure to Shigella spp. among the population," the study authors wrote. "This high prevalence is particularly alarming considering the severe nature of the disease and its potential for rapid transmission."

The authors add the high prevalence in Africa is even more worrisome given the number of conflicts in the region, which could cause overcrowding in refugee camps and elevate the risk of Shigella transmission. Given the levels of antibiotic resistance, they call for exploration of alternative treatments for shigellosis, with a particular focus on vaccine development.

This high prevalence is particularly alarming considering the severe nature of the disease and its potential for rapid transmission.

Afghanistan and Pakistan reported more wild poliovirus type 1 (WPV1) cases this week, part of a notable uptick in activity in the two countries where WPV1 is still endemic, the Global Polio Eradication Initiative (GPEI) said in its latest weekly update, as vaccination efforts are poised to resume in Gaza.

Afghanistan reported 1 case in a patient from Hilmand province who had acute flaccid paralysis onset in September, raising the country's total for the year to 23. Pakistan reported 7 more WPV1 cases involving patients with paralysis onsets in August and September, 4 in Balochistan, 2 in Sindh, and 1 in Khyber Pakhtunkhwa. The country has now reported 39 cases in 2024.

Pakistan also reported two attacks on polio vaccination teams this week, one in Upper Orakzai, Khyber Pakhtunkhwa, that killed two policemen who were guarding vaccinators, and a bombing near a police security vehicle in Mastung, Balochistan, that killed nine people, including five children, according to media reports.

Elsewhere, three African countries reported more circulating vaccine-derived poliovirus type 2 (cVDPV2) cases—Chad (3 cases), Niger (1), and Nigeria (5). 

Polio vaccination to resume in Gaza

A third polio vaccination phase is slated to begin in northern Gaza tomorrow, following an October 23 postponement due to lack of access, lack of a humanitarian pause, bombardment, and mass evacuation orders that prevented families from bringing their children for immunization, the World Health Organization and UNICEF said today in a joint statement. 

Health officials have been vaccinating young children following the detection of a cVDPV2 case and positive findings from environmental samples. The groups raised concerns about the scaled-back area covered by the latest humanitarian pause, which will leave children in some towns inaccessible and make it challenging to reach the 90% coverage level needed to ensure the effectiveness of the campaign. 

Ethiopia is experiencing its worst malaria outbreak in 7 years, with more than 7.3 million cases reported since the first of the year, along with 1,157 deaths, the World Health Organization (WHO) said in a notification yesterday. Plasmodium falciparum is responsible for two thirds of the cases.

Owing to favorable ecologic conditions, the western part of the country has faced the biggest disease burden, with the most cases reported in Oromia, Amhara, Southwest, and South Ethiopia Regional State.

Males account for 56% of outpatient cases and 52% of inpatient admissions, which the WHO said may reflect movements of seasonal workers to high-malaria-burden areas. 

Persistent outbreaks, multiple risk factors

Ethiopia's malaria activity has increased over the past 4 years. In previous years, cases have peaked after primary and secondary rainy seasons, but outbreaks have persisted in several regions, including after the secondary season this spring. 

The WHO said the increasing trend and expanding endemic areas are likely related to several factors, including reduced vector-control efforts, protracted conflicts leading to population displacement, and loss of immunity due to reductions in malaria control efforts.

The national risk to Ethiopia is high due to the spread of Anopheles stephensi mosquitoes, which thrive in urban areas, weather anomalies, drought, food insecurity, and poor security, the WHO said. Meanwhile, the risk to the region is moderate for neighboring countries, which are also experiencing outbreaks.

Chronic wasting disease (CWD) has been identified at a Kerr County, Texas, deer farm, the county's first confirmed detection, the Texas Parks and Wildlife Department (TPWD) reported yesterday.

A 3-year-old white-tailed doe tested positive for the fatal prion disease on routine postmortem testing, a finding confirmed by the National Veterinary Services Laboratory (NVSL) in Ames, Iowa. The exact location of the farm wasn't disclosed in the news release.

In December 2023, after a 14-month-old white-tailed buck at the Kerr Wildlife Management Area deer-research facility initially tested positive for CWD, TPWD euthanized all deer in the herd, only to receive a negative test result in January 2024 from the NVSL. No other deer tested positive. TPWD said the decision to cull the herd ended nearly 50 years of white-tailed deer research at the facility.

State's first detection was in 2012

CWD was first found in Texas in 2012 in a wild mule deer in the Hueco Mountains near the state's border with New Mexico. Since then, it has been identified in captive and wild cervids, including white-tailed deer, mule deer, red deer, and elk, TPWD said.

CWD was first found in Texas in 2012 in a wild mule deer in the Hueco Mountains near the state's border with New Mexico.

CWD, a neurologic disease caused by misfolded infectious proteins called prions, affects cervids such as deer, elk, moose, and reindeer. Prions are extremely resilient and can persist in the environment for years. CWD poses an ongoing threat to cervids, because it can spread from animal to animal and through environmental contamination. 

The disease isn't known to infect humans, but officials recommend not eating meat from a sick animal and using precautions when field-dressing or butchering cervids.